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[ Source: pplacer  ]

Package: pplacer (1.1~alpha19-7)

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phylogenetic placement and downstream analysis

Pplacer places reads on a phylogenetic tree. guppy (Grand Unified Phylogenetic Placement Yanalyzer) yanalyzes them. rppr is a helpful tool for working with reference packages.

Pplacer places query sequences on a fixed reference phylogenetic tree to maximize phylogenetic likelihood or posterior probability according to a reference alignment. Pplacer is designed to be fast, to give useful information about uncertainty, and to offer advanced visualization and downstream analysis.

Other Packages Related to pplacer

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Download pplacer

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 3,008.7 kB18,967.0 kB [list of files]
arm64 3,728.3 kB22,351.0 kB [list of files]
ppc64 (unofficial port) 3,154.9 kB23,937.0 kB [list of files]
ppc64el 3,177.2 kB21,185.0 kB [list of files]
riscv64 3,040.4 kB19,807.0 kB [list of files]
s390x 2,848.6 kB20,928.0 kB [list of files]