[ Source: gsort ]
Package: gsort (0.1.4-3 and others)
Links for gsort
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Download Source Package gsort:
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
sort genomic data
gsort is a tool to sort genomic files according to a genomefile. For example, to sort VCF to have order: X, Y, 2, 1, 3, ... and the header needs to be kept at the top.
As a more likely example, if a file nneds to be sorted to match GATK order (1 ... X, Y, MT) which is not possible with any other sorting tool. With gsort one can simply place MT as the last chrom in the ".genome" file.
It will also be useful for getting files ready for use in bedtools.
Other Packages Related to gsort
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- dep: libc6 (>= 2.34) [not alpha]
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C Library: Shared libraries
also a virtual package provided by libc6.1-udeb
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- dep: libgcc-s1 (>= 3.3.1) [ppc64, x32]
- GCC support library
- dep: libgcc-s1 (>= 3.4) [alpha, sparc64]
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- dep: libgo22 [alpha, ppc64, sparc64, x32]
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Download gsort
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| alpha (unofficial port) | 0.1.4-3+b9 | 168.2 kB | 806.0 kB | [list of files] |
| amd64 | 0.1.4-3+b15 | 1,870.6 kB | 5,421.0 kB | [list of files] |
| arm64 | 0.1.4-3+b15 | 1,612.4 kB | 5,141.0 kB | [list of files] |
| armel | 0.1.4-3+b15 | 1,598.9 kB | 5,308.0 kB | [list of files] |
| armhf | 0.1.4-3+b15 | 1,592.2 kB | 5,280.0 kB | [list of files] |
| i386 | 0.1.4-3+b15 | 1,739.2 kB | 5,344.0 kB | [list of files] |
| mips64el | 0.1.4-3+b15 | 1,460.8 kB | 5,992.0 kB | [list of files] |
| ppc64 (unofficial port) | 0.1.4-3+b10 | 195.7 kB | 1,123.0 kB | [list of files] |
| ppc64el | 0.1.4-3+b15 | 1,606.3 kB | 5,332.0 kB | [list of files] |
| riscv64 (unofficial port) | 0.1.4-3+b9 | 1,551.6 kB | 5,008.0 kB | [list of files] |
| s390x | 0.1.4-3+b15 | 1,710.6 kB | 5,697.0 kB | [list of files] |
| sparc64 (unofficial port) | 0.1.4-3+b8 | 165.5 kB | 1,257.0 kB | [list of files] |
| x32 (unofficial port) | 0.1.4-3+b10 | 175.1 kB | 703.0 kB | [list of files] |